MolNFT v1 · #126010 · protein
1.41 a resolution structure of ptxb from trichodesmium erythraeum IMS101 in complex with methylphosphonate
5LQ1: “1.41 a resolution structure of ptxb from trichodesmium erythraeum IMS101 in complex with methylphosphonate”. X-ray diffraction, 2 ligands (GB, MG). MolNFT v1 #126010 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5LQ1
- Type
- protein
- Length
- 516 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q119I9
- Ligands
- GB, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 260 | — | Q119I9 |
| B | — | protein | 256 | — | Q119I9 |
Ligands and binding sites
- GB · Methylphosphonic acid ester group · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 4 copies · chains A, B
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LQ1 · 1.41 A resolution structure of PtxB from Trichodesmium erythraeum IMS101 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q119I9
- Elsewhere: RCSB PDB 5LQ1 · PDBe 5LQ1 · UniProt Q119I9
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