MolNFT v1 · #125886 · protein

Specific-DNA binding activity of the cross-brace zinc finger motif of the piggybac transposase

5LME: “Specific-DNA binding activity of the cross-brace zinc finger motif of the piggybac transposase”. Solution nmr, 1 ligand (ZN), 1 pocket (best druggability 0.29). MolNFT v1 #125886 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 5LME
Type: protein
Length: 43 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Piggybac transposase
UniProt: Q27026
Ligands: ZN
Pockets: 1 · best druggability 0.29

Structure

solution nmr · 1 distinct chain · 0% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Piggybac transposase	protein	43	0% helix, 14% strand	Q27026

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.29	0.75	17	empty

Compared structures

5LME · Specific-DNA binding activity of the cross-brace zinc finger motif of the piggyBac… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q27026
Elsewhere: RCSB PDB 5LME · PDBe 5LME · UniProt Q27026

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