MolNFT v1 · #125405 · protein
Structure of exuperantia exo-like and SAM-like domains
5L80 · Maternal protein EXUPERANTIA,MATERNAL protein exuperantia: “Structure of exuperantia exo-like and SAM-like domains”. X-ray diffraction, 7 pockets (best druggability 0.70). MolNFT v1 #125405 on GenesisL1: 3D structure, binding sites…
- PDB
- 5L80
- Type
- protein
- Length
- 570 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maternal protein EXUPERANTIA,MATERNAL protein exuperantia
- UniProt
- P28750
- Pockets
- 7 · best druggability 0.70
Structure
x-ray diffraction · 2 distinct chains · 49% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maternal protein EXUPERANTIA,MATERNAL protein exuperantia | protein | 301 | 51% helix, 18% strand | P28750 |
| B | Maternal protein EXUPERANTIA,MATERNAL protein exuperantia | protein | 269 | 48% helix, 19% strand | P28750 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 593 | 0.70 | 0.79 | 56 | empty |
| 2 | 389 | 0.60 | 0.76 | 50 | empty |
| 3 | 98 | 0.55 | 0.84 | 19 | empty |
| 4 | 141 | 0.50 | 0.79 | 20 | empty |
| 5 | 102 | 0.39 | 0.76 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 1433 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28750
- Elsewhere: RCSB PDB 5L80 · PDBe 5L80 · UniProt P28750
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.