MolNFT v1 · #125119 · protein
Structure of heme oxygenase from leptospira interrogans
5KZL: “Structure of heme oxygenase from leptospira interrogans”. X-ray diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.70). MolNFT v1 #125119 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KZL
- Type
- protein
- Length
- 205 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Heme oxygenase
- EC
- 1.14.14.18
- UniProt
- A0A109I1W7
- Ligands
- HEM
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Heme oxygenase (EC 1.14.14.18) | protein | 205 | 75% helix, 0% strand | A0A109I1W7 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 316 | 0.70 | 0.83 | 32 | HEM |
Compared structures
- 5KZL · Structure of Heme Oxygenase from Leptospira interrogans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A109I1W7
- Elsewhere: RCSB PDB 5KZL · PDBe 5KZL · UniProt A0A109I1W7
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