MolNFT v1 · #125031 · protein

Crystal structure of rat cerebellin-1

5KWR: “Crystal structure of rat cerebellin-1”. X-ray diffraction, 2 ligands (NAG, FUC). MolNFT v1 #125031 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KWR
Type: protein
Length: 139 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cerebellin-1
UniProt: P63182
Ligands: NAG, FUC

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 51% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cerebellin-1	protein	139	6% helix, 51% strand	P63182

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
FUC · alpha-L-fucopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 glycan (N-glycosylation).

Compared structures

5KWR · Crystal structure of rat Cerebellin-1 · the same entry in another collection · chain A against A, TM-score 1.00
P63182 · AlphaFold monomer V2.0 prediction for cerebellin-1 (P63182) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P63182
Elsewhere: RCSB PDB 5KWR · PDBe 5KWR · UniProt P63182

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.