MolNFT v1 · #124872 · protein
Crystal structure of listeria monocytogenes opuca cbs domain dimer in complex with cyclic-di-AMP
5KS7: “Crystal structure of listeria monocytogenes opuca cbs domain dimer in complex with cyclic-di-AMP”. X-ray diffraction, 1 ligand (2BA). MolNFT v1 #124872 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5KS7
- Type
- protein
- Length
- 245 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KHT9
- Ligands
- 2BA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 123 | — | Q9KHT9 |
| B | — | protein | 122 | — | Q9KHT9 |
Ligands and binding sites
- 2BA · (2r,3r,3as,5r,7ar,9r,10r,10as,12r,14ar)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-D:3', 2'-J][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5, 10,12-tetrol 5,12-dioxide · ligand · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KS7 · Crystal structure of Listeria monocytogenes OpuCA CBS domain dimer in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9KHT9 · AlphaFold monomer V2.0 prediction for carnitine transport ATP-binding protein opuca… · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KHT9
- Elsewhere: RCSB PDB 5KS7 · PDBe 5KS7 · UniProt Q9KHT9
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