MolNFT v1 · #124334 · protein

Crystal structure of CBLN1 (VAL55-GLY58 deletion mutant)

5KC6: “Crystal structure of CBLN1 (VAL55-GLY58 deletion mutant)”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #124334 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KC6
Type: protein
Length: 417 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P23435
Ligands: NAG

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	137	—	P23435
B	—	protein	144	—	P23435
C	—	protein	136	—	P23435

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KC6 · Crystal structure of Cbln1 (Val55-Gly58 deletion mutant) · the same entry in another collection · chain A against A, TM-score 1.00
P23435 · AlphaFold monomer V2.0 prediction for cerebellin-1 (P23435) · a predicted model of the same protein · chain C against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P23435
Elsewhere: RCSB PDB 5KC6 · PDBe 5KC6 · UniProt P23435

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