MolNFT v1 · #124240 · protein

Azotobacter vinelandii flavodoxin II

5K9B: “Azotobacter vinelandii flavodoxin II”. X-ray diffraction, 2 ligands (FMN, MG). MolNFT v1 #124240 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5K9B
Type: protein
Length: 179 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P00324
Ligands: FMN, MG

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	179	—	P00324

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · chains A
MG · Magnesium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5K9B · Azotobacter vinelandii Flavodoxin II · the same entry in another collection · chain A against A, TM-score 1.00
P00324 · AlphaFold monomer V2.0 prediction for flavodoxin 2 (P00324) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00324
Elsewhere: RCSB PDB 5K9B · PDBe 5K9B · UniProt P00324

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