MolNFT v1 · #124186 · protein

Microed structure of thaumatin at 2.5 a resolution

5K7Q · Thaumatin-1: “Microed structure of thaumatin at 2.5 a resolution”. Electron crystallography, 1 pocket (best druggability 0.54). MolNFT v1 #124186 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5K7Q
Type: protein
Length: 207 residues
Chains: 1
Method: electron crystallography
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Thaumatin-1
UniProt: P02883
Pockets: 1 · best druggability 0.54

Structure

electron crystallography · 1 distinct chain · 9% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Thaumatin-1	protein	207	9% helix, 35% strand	P02883

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	51	0.54	0.89	18	empty

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

5K7Q · MicroED structure of thaumatin at 2.5 A resolution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02883
Elsewhere: RCSB PDB 5K7Q · PDBe 5K7Q · UniProt P02883

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