MolNFT v1 · #124155 · protein

Sidekick-1 immunoglobulin domains 1-4, crystal form 2

5K6V: “Sidekick-1 immunoglobulin domains 1-4, crystal form 2”. X-ray diffraction, 3 ligands (NAG, BMA, ZN). MolNFT v1 #124155 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5K6V
Type: protein
Length: 379 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q3UH53
Ligands: NAG, BMA, ZN

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	379	—	Q3UH53

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A
BMA · beta-D-mannopyranose · sugar
ZN · Zinc ion · metal · 6 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5K6V · Sidekick-1 immunoglobulin domains 1-4, crystal form 2 · the same entry in another collection · chain A against A, TM-score 1.00
Q3UH53 · AlphaFold monomer V2.0 prediction for protein sidekick-1 (Q3UH53) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3UH53
Elsewhere: RCSB PDB 5K6V · PDBe 5K6V · UniProt Q3UH53

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