MolNFT v1 · #124114 · protein + DNA
Structure of aspa-DNA complex: novel centromere bindng protein- centromere complex
5K5Q: “Structure of aspa-DNA complex: novel centromere bindng protein- centromere complex”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #124114 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5K5Q
- Type
- protein + DNA
- Length
- 609 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O93706
- Ligands
- PO4
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, E | — | protein | 91 | — | O93706 |
| D | — | protein | 90 | — | O93706 |
| A | — | protein | 89 | — | O93706 |
| B, F | — | protein | 92 | — | O93706 |
| P | — | dna | 32 | — | — |
| N | — | dna | 32 | — | — |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5K5Q · Structure of AspA-DNA complex: novel centromere bindng protein-centromere complex · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O93706
- Elsewhere: RCSB PDB 5K5Q · PDBe 5K5Q · UniProt O93706
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