MolNFT v1 · #123992 · protein
Structure of burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase BPSS2021
5K1R: “Structure of burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase BPSS2021”. X-ray diffraction, 1 ligand (PLP). MolNFT v1 #123992 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5K1R
- Type
- protein
- Length
- 879 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q63IP8
- Ligands
- PLP
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 439 | — | Q63IP8 |
| B | — | protein | 440 | — | Q63IP8 |
Ligands and binding sites
- PLP · Pyridoxal-5'-phosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5K1R · Structure of Burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase Bpss2021 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63IP8
- Elsewhere: RCSB PDB 5K1R · PDBe 5K1R · UniProt Q63IP8
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