MolNFT v1 · #123982 · protein
Crystal structure of reduced PRX3 from vibrio vulnificus
5K1G · 1-cys peroxiredoxin: “Crystal structure of reduced PRX3 from vibrio vulnificus”. X-ray diffraction, 2 pockets (best druggability 0.36). MolNFT v1 #123982 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5K1G
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 1-cys peroxiredoxin
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 1-cys peroxiredoxin | protein | 155 | 34% helix, 28% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.36 | 0.78 | 15 | empty |
| 2 | 67 | 0.30 | 0.74 | 18 | empty |
Compared structures
- 5K1G · Crystal structure of reduced Prx3 from Vibrio vulnificus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5K1G · PDBe 5K1G
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