MolNFT v1 · #123608 · protein

Structure of limonene epoxide hydrolase mutant - H-2-H5

5JPP: “Structure of limonene epoxide hydrolase mutant - H-2-H5”. X-ray diffraction, 1 pocket (best druggability 0.82). MolNFT v1 #123608 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5JPP
Type: protein
Length: 236 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Limonene epoxide hydrolase
Pockets: 1 · best druggability 0.82

Structure

x-ray diffraction · 1 distinct chain · 26% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Limonene epoxide hydrolase	protein	118	26% helix, 47% strand	—

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1120	0.82	0.82	75	empty

Interfaces

1 interface between chains.

A–B · 546 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

5JPP · Structure of limonene epoxide hydrolase mutant - H-2-H5 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5JPP · PDBe 5JPP

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