MolNFT v1 · #123502 · protein
The structure of aerobactin synthetase iuca from a hypervirulent pathotype of klebsiella pneumoniae
5JM7 · Aerobactin synthase iuca: “The structure of aerobactin synthetase iuca from a hypervirulent pathotype of klebsiella pneumoniae”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.78). MolNFT v1 #123502 on GenesisL1…
- PDB
- 5JM7
- Type
- protein
- Length
- 548 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aerobactin synthase iuca
- UniProt
- A0A0X9V8F4
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aerobactin synthase iuca | protein | 548 | 45% helix, 22% strand | A0A0X9V8F4 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 776 | 0.78 | 0.82 | 81 | SO4 |
| 2 | 124 | 0.47 | 0.78 | 25 | empty |
Compared structures
- 5JM7 · The structure of aerobactin synthetase IucA from a hypervirulent pathotype of Klebsiella… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0X9V8F4
- Elsewhere: RCSB PDB 5JM7 · PDBe 5JM7 · UniProt A0A0X9V8F4
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