MolNFT v1 · #123433 · protein
The crystal structure of immunity protein PA5088 from pseudomonas aeruginosa
5JJO · Uncharacterized protein: “The crystal structure of immunity protein PA5088 from pseudomonas aeruginosa”. X-ray diffraction, 1 ligand (AU), 2 pockets (best druggability 0.32). MolNFT v1 #123433 on GenesisL1: 3D structure, binding…
- PDB
- 5JJO
- Type
- protein
- Length
- 260 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q9HU95
- Ligands
- AU
- Pockets
- 2 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 63% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 260 | 63% helix, 1% strand | Q9HU95 |
Ligands and binding sites
- AU · Gold ion · metal · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.32 | 0.72 | 15 | empty |
| 2 | 58 | 0.27 | 0.73 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5JJO · The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HU95
- Elsewhere: RCSB PDB 5JJO · PDBe 5JJO · UniProt Q9HU95
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.