MolNFT v1 · #12332 · protein

Solution structure of the amphipathic domain of yopd from yersinia

1KDL · Yopd protein: “Solution structure of the amphipathic domain of yopd from yersinia”. Solution nmr. MolNFT v1 #12332 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1KDL
Type: protein
Length: 23 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Yopd protein
UniProt: Q06131

Structure

solution nmr · 1 distinct chain · 52% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Yopd protein	protein	23	52% helix, 0% strand	Q06131

Compared structures

1KDL · Solution structure of the amphipathic domain of YopD from Yersinia · the same entry in another collection · chain A against A, TM-score 1.00
Q06131 · AlphaFold monomer V2.0 prediction for protein yopd (Q06131) · a predicted model of the same protein · chain A against A, TM-score 0.42

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q06131
Elsewhere: RCSB PDB 1KDL · PDBe 1KDL · UniProt Q06131

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