MolNFT v1 · #123175 · protein
Crystal structure of liuc
5JBW · 3-hydroxybutyryl-CoA dehydratase: “Crystal structure of liuc”. X-ray diffraction, 3 pockets (best druggability 0.46). MolNFT v1 #123175 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5JBW
- Type
- protein
- Length
- 259 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 3-hydroxybutyryl-CoA dehydratase
- EC
- 4.2.1.55
- UniProt
- Q1D5Y4
- Pockets
- 3 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 52% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) | protein | 259 | 52% helix, 17% strand | Q1D5Y4 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 171 | 0.46 | 0.76 | 23 | empty |
| 2 | 142 | 0.45 | 0.76 | 22 | empty |
| 3 | 67 | 0.30 | 0.74 | 16 | empty |
Compared structures
- 5JBW · Crystal structure of LiuC · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1D5Y4
- Elsewhere: RCSB PDB 5JBW · PDBe 5JBW · UniProt Q1D5Y4
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