MolNFT v1 · #123056 · protein
Human mof C316S, E350Q crystal structure
5J8C · Histone acetyltransferase KAT8: “Human mof C316S, E350Q crystal structure”. X-ray diffraction, 3 ligands (NA, ZN, CL), 3 pockets (best druggability 0.68). MolNFT v1 #123056 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5J8C
- Type
- protein
- Length
- 272 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histone acetyltransferase KAT8
- EC
- 2.3.1.48
- UniProt
- Q9H7Z6
- Ligands
- NA, ZN, CL
- Pockets
- 3 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone acetyltransferase KAT8 (EC 2.3.1.48) | protein | 272 | 35% helix, 22% strand | Q9H7Z6 |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
- CL · Chloride ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 232 | 0.68 | 0.85 | 43 | CL |
| 2 | 70 | 0.36 | 0.77 | 15 | NA |
| 3 | 62 | 0.34 | 0.77 | 18 | empty |
Modifications
Observed in the structure: 1 modified (acetylation).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H7Z6
- Elsewhere: RCSB PDB 5J8C · PDBe 5J8C · UniProt Q9H7Z6
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