MolNFT v1 · #122804 · protein
De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
5J0H · Design construct 2L6HC3_13: “De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity”. X-ray diffraction, 1 pocket (best druggability 0.38). MolNFT v1 #122804 on GenesisL1: 3D structure…
- PDB
- 5J0H
- Type
- protein
- Length
- 144 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Design construct 2L6HC3_13
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Design construct 2L6HC3_13 | protein | 72 | 93% helix, 0% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 113 | 0.38 | 0.75 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 484 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 5J0H · De novo design of protein homo-oligomers with modular hydrogen bond network-mediated… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5J0H · PDBe 5J0H
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