MolNFT v1 · #122795 · protein

Crystal structure of yeast ENT5 N-terminal domain-native P21

5J08 · Epsin-5: “Crystal structure of yeast ENT5 N-terminal domain-native P21”. X-ray diffraction, 1 pocket (best druggability 0.53). MolNFT v1 #122795 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5J08
Type: protein
Length: 163 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Epsin-5
UniProt: Q03769
Pockets: 1 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 67% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Epsin-5	protein	163	67% helix, 0% strand	Q03769

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	74	0.53	0.85	20	empty

Compared structures

5J08 · Crystal structure of yeast Ent5 N-terminal domain-native P21 · the same entry in another collection · chain A against A, TM-score 1.00
Q03769 · AlphaFold monomer V2.0 prediction for epsin-5 (Q03769) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q03769
Elsewhere: RCSB PDB 5J08 · PDBe 5J08 · UniProt Q03769

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