MolNFT v1 · #122741 · DNA
Comparison of X-ray crystal structures of a tetradecamer sequence D(CCCGGGTACCCGGG)2 at 1.7 resolution
5IYE · DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3'): “Comparison of X-ray crystal structures of a tetradecamer sequence D(CCCGGGTACCCGGG)2 at 1.7 resolution”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #122741 on GenesisL1: 3D…
- PDB
- 5IYE
- Type
- DNA
- Length
- 28 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3')
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3') | dna | 14 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 735 Ų buried · 57 hydrogen bonds · nucleic-nucleic
Compared structures
- 5IYE · Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5IYE · PDBe 5IYE
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