MolNFT v1 · #122654 · protein
Crystal structure of streptomyces griseoflavus cofilin
5IVU: “Crystal structure of streptomyces griseoflavus cofilin”. X-ray diffraction, 2 pockets (best druggability 0.41). MolNFT v1 #122654 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5IVU
- Type
- protein
- Length
- 258 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cofilin
- UniProt
- D9XKI5
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 2 distinct chains · 34% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cofilin | protein | 126 | 36% helix, 31% strand | D9XKI5 |
| B | Cofilin | protein | 132 | 33% helix, 30% strand | D9XKI5 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.41 | 0.76 | 21 | empty |
| 2 | 89 | 0.38 | 0.77 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 328 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 5IVU · Crystal Structure of Streptomyces griseoflavus Cofilin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D9XKI5
- Elsewhere: RCSB PDB 5IVU · PDBe 5IVU · UniProt D9XKI5
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