MolNFT v1 · #122629 · DNA
Solution structure of DNA dodecamer with 8-oxoguanine at 4TH position
5IV1 · DNA (5'-D(*CP*GP*CP*(8OG)P*AP*AP*TP*TP*CP*GP*CP*G)-3'): “Solution structure of DNA dodecamer with 8-oxoguanine at 4TH position”. Solution nmr. MolNFT v1 #122629 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5IV1
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*GP*CP*(8OG)P*AP*AP*TP*TP*CP*GP*CP*G)-3')
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*GP*CP*(8OG)P*AP*AP*TP*TP*CP*GP*CP*G)-3') | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 550 Ų buried · 61 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 5IV1 · Solution Structure of DNA Dodecamer with 8-oxoguanine at 4th Position · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5IV1 · PDBe 5IV1
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