MolNFT v1 · #122569 · protein
Crystal structure of mycobacterium avium SERB2 mutant D343N
5IT4 · Phosphoserine phosphatase: “Crystal structure of mycobacterium avium SERB2 mutant D343N”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.44). MolNFT v1 #122569 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5IT4
- Type
- protein
- Length
- 395 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphoserine phosphatase
- EC
- 3.1.3.3
- UniProt
- A0QJI1
- Ligands
- MG
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphoserine phosphatase (EC 3.1.3.3) | protein | 395 | 40% helix, 28% strand | A0QJI1 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.44 | 0.80 | 19 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0QJI1
- Elsewhere: RCSB PDB 5IT4 · PDBe 5IT4 · UniProt A0QJI1
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