MolNFT v1 · #122404 · protein

Unliganded form of bovine beta-lactoglobulin, ambient pressure

5IO5: “Unliganded form of bovine beta-lactoglobulin, ambient pressure”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.64). MolNFT v1 #122404 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5IO5
Type: protein
Length: 162 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-lactoglobulin
UniProt: P02754
Ligands: CL
Pockets: 1 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-lactoglobulin	protein	162	16% helix, 40% strand	P02754

Ligands and binding sites

CL · Chloride ion · ion

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	205	0.64	0.83	35	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5IO5 · Unliganded form of bovine beta-lactoglobulin, ambient pressure · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02754
Elsewhere: RCSB PDB 5IO5 · PDBe 5IO5 · UniProt P02754

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