MolNFT v1 · #122364 · protein

A fragment of conserved hypothetical protein RV3899C (residues 184- 410) from mycobacterium tuberculosis

5IMU · Tat (twin-arginine translocation) pathway signal sequence…: “A fragment of conserved hypothetical protein RV3899C (residues 184- 410) from mycobacterium tuberculosis”. X-ray diffraction, 1 ligand (K), 3 pockets (best druggability…

PDB: 5IMU
Type: protein
Length: 217 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tat (twin-arginine translocation) pathway signal sequence containing protein
UniProt: O05446
Ligands: K
Pockets: 3 · best druggability 0.49

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tat (twin-arginine translocation) pathway signal sequence containing protein	protein	217	49% helix, 8% strand	O05446

Ligands and binding sites

K · Potassium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.49	0.86	15	empty
2	52	0.35	0.79	12	empty
3	52	0.25	0.73	13	empty

Compared structures

5IMU · A fragment of conserved hypothetical protein Rv3899c (residues 184-410) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O05446
Elsewhere: RCSB PDB 5IMU · PDBe 5IMU · UniProt O05446

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