MolNFT v1 · #1217 · protein
H91N delta 2 crystallin from duck
1AUW: “H91N delta 2 crystallin from duck”. X-ray diffraction, 20 pockets (best druggability 0.78). MolNFT v1 #1217 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1AUW
- Type
- protein
- Length
- 1,788 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Delta 2 crystallin
- EC
- 4.3.2.1
- UniProt
- P24058
- Pockets
- 20 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 69% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Delta 2 crystallin (EC 4.3.2.1) | protein | 447 | 69% helix, 5% strand | P24058 |
Pockets
20 pockets found on a 1 Å grid, 16 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 91 | 0.78 | 0.99 | 22 | empty |
| 2 | 93 | 0.78 | 0.98 | 22 | empty |
| 3 | 818 | 0.76 | 0.80 | 69 | empty |
| 4 | 746 | 0.76 | 0.81 | 56 | empty |
| 5 | 731 | 0.74 | 0.80 | 56 | empty |
Interfaces
6 interfaces between chains.
- C–D · 3965 Ų buried · 78 hydrogen bonds · protein-protein
- A–B · 3960 Ų buried · 71 hydrogen bonds · protein-protein
- B–C · 1900 Ų buried · 24 hydrogen bonds · protein-protein
- A–D · 1884 Ų buried · 24 hydrogen bonds · protein-protein
- A–C · 1843 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P24058
- Elsewhere: RCSB PDB 1AUW · PDBe 1AUW · UniProt P24058
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