MolNFT v1 · #121626 · protein
Crystal structure of spinosyn rhamnosyl 4'-O-methyltransferase spnh mutant T242Q from saccharopolyspora spinosa
5I10 · Probable O-methyltransferase: “Crystal structure of spinosyn rhamnosyl 4'-O-methyltransferase spnh mutant T242Q from saccharopolyspora…”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.42). MolNFT v1 #121626 on…
- PDB
- 5I10
- Type
- protein
- Length
- 192 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable O-methyltransferase
- UniProt
- Q9ALM9
- Ligands
- MG
- Pockets
- 1 · best druggability 0.42
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable O-methyltransferase | protein | 192 | 45% helix, 19% strand | Q9ALM9 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 104 | 0.42 | 0.77 | 31 | empty |
Compared structures
- 5I10 · Crystal structure of spinosyn rhamnosyl 4'-O-methyltransferase spnh mutant T242Q from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ALM9
- Elsewhere: RCSB PDB 5I10 · PDBe 5I10 · UniProt Q9ALM9
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