MolNFT v1 · #121623 · protein
Copper-bound M90I variant of uropathogenic escherichia COLI strain F11 fetp
5I0X · Periplasmic protein-probably involved in high-affinity FE2+…: “Copper-bound M90I variant of uropathogenic escherichia COLI strain F11 fetp”. X-ray diffraction, 1 ligand (CU), 2 pockets (best druggability 0.53). MolNFT v1 #121623 on…
- PDB
- 5I0X
- Type
- protein
- Length
- 311 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Periplasmic protein-probably involved in high-affinity FE2+ transport
- UniProt
- A0A0J9WZP9
- Ligands
- CU
- Pockets
- 2 · best druggability 0.53
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Periplasmic protein-probably involved in high-affinity FE2+ transport | protein | 153 | 5% helix, 51% strand | A0A0J9WZP9 |
| B | Periplasmic protein-probably involved in high-affinity FE2+ transport | protein | 158 | 4% helix, 46% strand | A0A0J9WZP9 |
Ligands and binding sites
- CU · Copper (II) ion · metal · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 171 | 0.53 | 0.79 | 32 | empty |
| 2 | 69 | 0.29 | 0.73 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 1739 Ų buried · 23 hydrogen bonds · protein-protein
Compared structures
- 5I0X · Copper-bound M90I variant of uropathogenic escherichia COLI strain F11 fetp · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0J9WZP9
- Elsewhere: RCSB PDB 5I0X · PDBe 5I0X · UniProt A0A0J9WZP9
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