MolNFT v1 · #121557 · protein
Crystal structure of PHAC1 from ralstonia eutropha
5HZ2 · Poly-beta-hydroxybutyrate polymerase: “Crystal structure of PHAC1 from ralstonia eutropha”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.66). MolNFT v1 #121557 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5HZ2
- Type
- protein
- Length
- 388 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Poly-beta-hydroxybutyrate polymerase
- EC
- 2.3.1.-
- UniProt
- P23608
- Ligands
- SO4
- Pockets
- 3 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-) | protein | 388 | 33% helix, 20% strand | P23608 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.66 | 0.90 | 26 | SO4 |
| 2 | 243 | 0.53 | 0.76 | 35 | GOL |
| 3 | 68 | 0.40 | 0.80 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 5HZ2 · Crystal structure of PhaC1 from Ralstonia eutropha · the same entry in another collection · chain A against A, TM-score 1.00
- P23608 · AlphaFold monomer V2.0 prediction for POLY(3-hydroxyalkanoate) polymerase subunit phac… · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P23608
- Elsewhere: RCSB PDB 5HZ2 · PDBe 5HZ2 · UniProt P23608
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.