MolNFT v1 · #121491 · protein

Metal ABC transporter from listeria monocytogenes

5HX7 · Manganese-binding lipoprotein mnta: “Metal ABC transporter from listeria monocytogenes”. X-ray diffraction, 2 pockets (best druggability 0.48). MolNFT v1 #121491 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5HX7
Type: protein
Length: 279 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Manganese-binding lipoprotein mnta
UniProt: Q8Y653
Pockets: 2 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Manganese-binding lipoprotein mnta	protein	279	49% helix, 16% strand	Q8Y653

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	136	0.48	0.78	27	empty
2	58	0.26	0.73	13	empty

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

5HX7 · Metal ABC transporter from Listeria monocytogenes · the same entry in another collection · chain A against A, TM-score 1.00
Q8Y653 · AlphaFold monomer V2.0 prediction for manganese-binding lipoprotein mnta (Q8Y653) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8Y653
Elsewhere: RCSB PDB 5HX7 · PDBe 5HX7 · UniProt Q8Y653

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