MolNFT v1 · #121329 · protein
Plasmdoium vivax lactate dehydrogenase
5HS4 · L-lactate dehydrogenase: “Plasmdoium vivax lactate dehydrogenase”. X-ray diffraction, 2 pockets (best druggability 0.63). MolNFT v1 #121329 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HS4
- Type
- protein
- Length
- 301 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- L-lactate dehydrogenase
- EC
- 1.1.1.27
- UniProt
- Q4PRK9
- Pockets
- 2 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-lactate dehydrogenase (EC 1.1.1.27) | protein | 301 | 50% helix, 21% strand | Q4PRK9 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 463 | 0.63 | 0.76 | 55 | empty |
| 2 | 138 | 0.44 | 0.76 | 28 | empty |
Compared structures
- 5HS4 · Plasmdoium Vivax Lactate dehydrogenase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4PRK9
- Elsewhere: RCSB PDB 5HS4 · PDBe 5HS4 · UniProt Q4PRK9
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