MolNFT v1 · #121223 · protein
X-ray crystallographic structure of an abeta 17-36 beta-hairpin. LV(PHI)FAEDCGSNKCAII(SAR)L(ORN)V
5HOW · Amyloid beta A4 protein: “X-ray crystallographic structure of an abeta 17-36 beta-hairpin. LV(PHI)FAEDCGSNKCAII(SAR)L(ORN)V”. X-ray diffraction. MolNFT v1 #121223 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HOW
- Type
- protein
- Length
- 126 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amyloid beta A4 protein
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 67% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | Amyloid beta A4 protein | protein | 21 | 0% helix, 67% strand | — |
Interfaces
10 interfaces between chains.
- A–B · 264 Ų buried · 5 hydrogen bonds · protein-protein
- C–F · 260 Ų buried · 5 hydrogen bonds · protein-protein
- A–E · 259 Ų buried · 6 hydrogen bonds · protein-protein
- D–F · 257 Ų buried · 6 hydrogen bonds · protein-protein
- C–D · 250 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 24 modified, 6 disulfide (nonstandard, disulfide, methylation).
Compared structures
- 5HOW · X-ray crystallographic structure of an Abeta 17-36 beta-hairpin.… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5HOW · PDBe 5HOW
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