MolNFT v1 · #121028 · protein
The structure of pedv NSP9
5HIZ · Non-structural protein 9: “The structure of pedv NSP9”. X-ray diffraction, 2 pockets (best druggability 0.36). MolNFT v1 #121028 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5HIZ
- Type
- protein
- Length
- 192 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Non-structural protein 9
- UniProt
- P0C6Y4
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Non-structural protein 9 | protein | 96 | 11% helix, 50% strand | P0C6Y4 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.36 | 0.74 | 14 | empty |
| 2 | 67 | 0.34 | 0.76 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 519 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
- 5HIZ · The structure of PEDV NSP9 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C6Y4
- Elsewhere: RCSB PDB 5HIZ · PDBe 5HIZ · UniProt P0C6Y4
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