MolNFT v1 · #120945 · protein

HLA*A2402 complexed with HIV NEF138 Y2F mutant 10MER epitope

5HGD: “HLA*A2402 complexed with HIV NEF138 Y2F mutant 10MER epitope”. X-ray diffraction. MolNFT v1 #120945 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5HGD
Type: protein
Length: 768 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P05534, P61769, P18801

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, D	—	protein	274	—	P05534
B, E	—	protein	100	—	P61769
C, F	—	protein	10	—	P18801

Compared structures

5HGD · HLA*A2402 complexed with HIV nef138 Y2F mutant 10mer epitope · the same entry in another collection · chain F against F, TM-score 1.00
P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P05534
Every structure of UniProt P61769
Every structure of UniProt P18801
Elsewhere: RCSB PDB 5HGD · PDBe 5HGD · UniProt P05534 · UniProt P61769 · UniProt P18801

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