MolNFT v1 · #120754 · protein
Crystal structure of intermembrane space region of chloroplast protein ARC6
5HAD · Protein accumulation and replication of chloroplasts 6…: “Crystal structure of intermembrane space region of chloroplast protein ARC6”. X-ray diffraction, 1 pocket (best druggability 0.37). MolNFT v1 #120754 on GenesisL1: 3D…
- PDB
- 5HAD
- Type
- protein
- Length
- 130 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein accumulation and replication of chloroplasts 6, chloroplastic
- UniProt
- Q9FIG9
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein accumulation and replication of chloroplasts 6, chloroplastic | protein | 130 | 35% helix, 47% strand | Q9FIG9 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.37 | 0.76 | 18 | EDO |
Compared structures
- 5HAD · Crystal structure of intermembrane space region of chloroplast protein ARC6 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9FIG9 · AlphaFold monomer V2.0 prediction for protein accumulation and replication of… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FIG9
- Elsewhere: RCSB PDB 5HAD · PDBe 5HAD · UniProt Q9FIG9
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