MolNFT v1 · #120584 · protein

MDM12 from K. lactis

5H55 · Mitochondrial distribution and morphology protein 12: “MDM12 from K. lactis”. X-ray diffraction, 1 pocket (best druggability 0.81). MolNFT v1 #120584 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5H55
Type: protein
Length: 207 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mitochondrial distribution and morphology protein 12
UniProt: Q6CUC3
Pockets: 1 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 23% helix, 36% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mitochondrial distribution and morphology protein 12	protein	207	23% helix, 36% strand	Q6CUC3

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	478	0.81	0.87	41	empty

Compared structures

5H55 · Mdm12 from K. lactis · the same entry in another collection · chain A against A, TM-score 1.00
Q6CUC3 · AlphaFold monomer V2.0 prediction for mitochondrial distribution and morphology protein… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6CUC3
Elsewhere: RCSB PDB 5H55 · PDBe 5H55 · UniProt Q6CUC3

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