Crystal structure of grasp domain of GRASP55 complexed with the GOLGIN45 C-terminus

Structure

x-ray diffraction · 2 distinct chains · 13% helix, 32% strand (DSSP).

Ligands and binding sites

• ZN · Zinc ion · metal · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Interfaces

1 interface between chains.

• A–B · 1279 Ų buried · 22 hydrogen bonds · protein-protein

Compared structures

• 5H3J · Crystal structure of Grasp domain of Grasp55 complexed with the Golgin45 C-terminus · the same entry in another collection · chain A against A, TM-score 1.00
• Q99JX3 · AlphaFold monomer V2.0 prediction for golgi reassembly-stacking protein 2 (Q99JX3) · a predicted model of the same protein · chain A against A, TM-score 0.75
• Q8R2X8 · AlphaFold monomer V2.0 prediction for golgin-45 (Q8R2X8) · a predicted model of the same protein · chain B against A, TM-score 0.27

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q99JX3
• Every structure of UniProt Q8R2X8
• Elsewhere: RCSB PDB 5H3J · PDBe 5H3J · UniProt Q99JX3 · UniProt Q8R2X8