MolNFT v1 · #120539 · protein
Crystal structure of oryza sativa acyl-CoA-binding protein 1
5H3G · Putative acyl-CoA binding protein (acbp): “Crystal structure of oryza sativa acyl-CoA-binding protein 1”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.32). MolNFT v1 #120539 on GenesisL1: 3D structure, binding…
- PDB
- 5H3G
- Type
- protein
- Length
- 93 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative acyl-CoA binding protein (acbp)
- UniProt
- Q84SC3
- Ligands
- CL
- Pockets
- 1 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative acyl-CoA binding protein (acbp) | protein | 93 | 65% helix, 0% strand | Q84SC3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.32 | 0.74 | 12 | empty |
Compared structures
- 5H3G · Crystal Structure of Oryza sativa Acyl-CoA-Binding Protein 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q84SC3 · AlphaFold monomer V2.0 prediction for acyl-CoA-binding domain- containing protein 1… · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84SC3
- Elsewhere: RCSB PDB 5H3G · PDBe 5H3G · UniProt Q84SC3
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