MolNFT v1 · #12041 · protein

Structural genomics, protein EC4020

1K4N: “Structural genomics, protein EC4020”. X-ray diffraction, 1 pocket (best druggability 0.57). MolNFT v1 #12041 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1K4N
Type: protein
Length: 183 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein EC4020
UniProt: P52007
Pockets: 1 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein EC4020	protein	183	33% helix, 33% strand	P52007

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	320	0.57	0.77	42	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

1K4N · Structural Genomics, Protein EC4020 · the same entry in another collection · chain A against A, TM-score 1.00
P52007 · AlphaFold monomer V2.0 prediction for protein yecm (P52007) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P52007
Elsewhere: RCSB PDB 1K4N · PDBe 1K4N · UniProt P52007

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