MolNFT v1 · #120374 · protein

Crystal structure of enzbleach xylanase V5N+V6N+K7R+K223R+K227R and T28C+T60C mutant

5GYB · Endo-1,4-beta-xylanase: “Crystal structure of enzbleach xylanase V5N+V6N+K7R+K223R+K227R and T28C+T60C mutant”. X-ray diffraction, 1 pocket (best druggability 0.48). MolNFT v1 #120374 on GenesisL1: 3D structure, binding sites and…

PDB: 5GYB
Type: protein
Length: 272 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-1,4-beta-xylanase
EC: 3.2.1.8
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 9% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-1,4-beta-xylanase (EC 3.2.1.8)	protein	272	9% helix, 45% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	182	0.48	0.76	24	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

5GYB · Crystal structure of ENZbleach xylanase V5N+V6N+K7R+K223R+K227R and T28C+T60C mutant · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5GYB · PDBe 5GYB

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