GL1X · GenesisL1 explorer

MolNFT v1 · #120245 · protein

Crystal structure of AU.CL-apo-E45C/R52C-rhlfr

5GU0 · Ferritin light chain: “Crystal structure of AU.CL-apo-E45C/R52C-rhlfr”. X-ray diffraction, 3 ligands (AU, CD, SO4), 1 pocket (best druggability 0.46). MolNFT v1 #120245 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5GU0
Type
protein
Length
170 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ferritin light chain
UniProt
P02791
Ligands
AU, CD, SO4
Pockets
1 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
XFerritin light chainprotein17074% helix, 0% strandP02791

Ligands and binding sites

  • AU · Gold ion · metal · 8 copies · chains X
  • CD · Cadmium ion · metal · 3 copies · chains X
  • SO4 · Sulfate ion · ion · 2 copies · chains X
  • EDO · 1,2-ethanediol · additive · 2 copies · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11120.460.7817empty

Compared structures

  • 5GU0 · Crystal structure of Au.CL-apo-E45C/R52C-rHLFr · the same entry in another collection · chain X against X, TM-score 1.00
  • P02791 · AlphaFold monomer V2.0 prediction for ferritin light chain (P02791) · a predicted model of the same protein · chain X against A, TM-score 0.99

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