MolNFT v1 · #119846 · protein

Crystal structure of cbp bromodomain with H3K56AC peptide

5GH9 · Creb-binding protein: “Crystal structure of cbp bromodomain with H3K56AC peptide”. X-ray diffraction. MolNFT v1 #119846 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5GH9
Type: protein
Length: 119 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Creb-binding protein; Histone H3
UniProt: Q92793, K7EMV3

Structure

x-ray diffraction · 2 distinct chains · 65% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Creb-binding protein	protein	113	68% helix, 0% strand	Q92793
B	Histone H3	protein	6	0% helix, 0% strand	K7EMV3

Interfaces

1 interface between chains.

A–B · 559 Å² buried · 8 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (acetylation).

Compared structures

5GH9 · Crystal structure of CBP Bromodomain with H3K56ac peptide · the same entry in another collection · chain A against A, TM-score 1.00
Q92793 · AlphaFold monomer V2.0 prediction for creb-binding protein (Q92793) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q92793
Every structure of UniProt K7EMV3
Elsewhere: RCSB PDB 5GH9 · PDBe 5GH9 · UniProt Q92793 · UniProt K7EMV3

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