MolNFT v1 · #119645 · protein

S. enterica hisa mutant DUP13-15(VVR)

5G2I: “S. enterica hisa mutant DUP13-15(VVR)”. X-ray diffraction, 2 ligands (NA, PO4), 1 pocket (best druggability 0.69). MolNFT v1 #119645 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5G2I
Type: protein
Length: 231 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
EC: 5.3.1.16
UniProt: V7IJE3
Ligands: NA, PO4
Pockets: 1 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	(EC 5.3.1.16)	protein	231	41% helix, 24% strand	V7IJE3

Ligands and binding sites

NA · Sodium ion · metal · chains A
PO4 · Phosphate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	538	0.69	0.79	46	PO4, NA

Compared structures

5G2I · S. enterica HisA mutant Dup13-15(VVR) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt V7IJE3
Elsewhere: RCSB PDB 5G2I · PDBe 5G2I · UniProt V7IJE3

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