MolNFT v1 · #119568 · protein

Crystal structure of a potato sti-kunitz bifunctional inhibitor of serine and aspartic proteases in space group P4322 and pH 7.4

5G00 · Kti-a protein: “Crystal structure of a potato sti-kunitz bifunctional inhibitor of serine and aspartic proteases in space…”. X-ray diffraction, 1 ligand (NAG), 1 pocket (best druggability 0.26). MolNFT v1 #119568 on GenesisL1: 3D…

PDB: 5G00
Type: protein
Length: 185 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Kti-a protein
UniProt: A0A097H118
Ligands: NAG
Pockets: 1 · best druggability 0.26

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Kti-a protein	protein	185	5% helix, 38% strand	A0A097H118

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	53	0.26	0.73	11	empty

Modifications

Observed in the structure: 3 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

5G00 · Crystal structure of a potato sti-kunitz bifunctional inhibitor of serine and aspartic… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A097H118
Elsewhere: RCSB PDB 5G00 · PDBe 5G00 · UniProt A0A097H118

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.