MolNFT v1 · #119249 · protein
Crystal structure of bacillus cereus metallo-beta-lactamase II
5FQA · Beta-lactamase 2: “Crystal structure of bacillus cereus metallo-beta-lactamase II”. X-ray diffraction, 3 ligands (FE, SO4, OH). MolNFT v1 #119249 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5FQA
- Type
- protein
- Length
- 217 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-lactamase 2
- EC
- 3.5.2.6
- UniProt
- P04190
- Ligands
- FE, SO4, OH
Structure
x-ray diffraction · 1 distinct chain · 25% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-lactamase 2 (EC 3.5.2.6) | protein | 217 | 25% helix, 31% strand | P04190 |
Ligands and binding sites
- FE · Fe (III) ion · metal · 2 copies · chains A
- SO4 · Sulfate ion · ion · chains A
- OH · Hydroxide ion · ion · chains A
- GOL · Glycerol · additive · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 5FQA · Crystal Structure of Bacillus cereus Metallo-Beta-Lactamase II · the same entry in another collection · chain A against A, TM-score 1.00
- P04190 · AlphaFold monomer V2.0 prediction for metallo-beta-lactamase type 2 (P04190) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04190
- Elsewhere: RCSB PDB 5FQA · PDBe 5FQA · UniProt P04190
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.