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MolNFT v1 · #119165 · protein

Structure of the KEAP1 kelch domain in complex with a small molecule inhibitor.

5FNU · Kelch-like ech-associated protein 1: “Structure of the KEAP1 kelch domain in complex with a small molecule inhibitor.”. X-ray diffraction, 2 ligands (L6I, CL), 1 pocket (best druggability 0.72). MolNFT v1 #119165 on GenesisL1: 3D…

PDB
5FNU
Type
protein
Length
288 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Kelch-like ech-associated protein 1
UniProt
Q9Z2X8
Ligands
L6I, CL
Pockets
1 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 1% helix, 50% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AKelch-like ech-associated protein 1protein2881% helix, 50% strandQ9Z2X8

Ligands and binding sites

  • L6I · (3S)-3-(7-methoxy-1-methyl-1H-benzo[d][1,2,3]triazol-5-yl)-3-(4-methyl-3-(((R)-4-methyl-1,1-dioxido-3,4-dihydro-2H-benzo[b][1,4,5]oxathiazepin-2-yl)methyl)phenyl)propanoic acid · ligand · chains A
  • CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
15910.720.8051L6I, CL

Compared structures

  • 5FNU · Structure of the Keap1 Kelch domain in complex with a small molecule inhibitor. · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9Z2X8 · AlphaFold monomer V2.0 prediction for kelch-like ech-associated protein 1 (Q9Z2X8) · a predicted model of the same protein · chain A against A, TM-score 1.00

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