MolNFT v1 · #118847 · protein

Crystal structure of the allergen profilin (zea M 12)

5FEF · Profilin-5: “Crystal structure of the allergen profilin (zea M 12)”. X-ray diffraction. MolNFT v1 #118847 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5FEF
Type: protein
Length: 132 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Profilin-5
UniProt: Q9FR39

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Profilin-5	protein	132	31% helix, 33% strand	Q9FR39

Ligands and binding sites

GOL · Glycerol · additive · 5 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5FEF · Crystal structure of the allergen profilin (Zea m 12) · the same entry in another collection · chain A against A, TM-score 1.00
Q9FR39 · AlphaFold monomer V2.0 prediction for profilin-5 (Q9FR39) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9FR39
Elsewhere: RCSB PDB 5FEF · PDBe 5FEF · UniProt Q9FR39

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