MolNFT v1 · #118799 · protein

Structure of anabaena (nostoc) sp. pcc 7120 red carotenoid protein binding a mixture of carotenoids

5FCY · Red carotenoid protein (rcp): “Structure of anabaena (nostoc) sp. pcc 7120 red carotenoid protein binding a mixture of carotenoids”. X-ray diffraction, 1 ligand (BCR), 1 pocket (best druggability 0.66). MolNFT v1 #118799 on…

PDB: 5FCY
Type: protein
Length: 134 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Red carotenoid protein (rcp)
UniProt: Q8YXT8
Ligands: BCR
Pockets: 1 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 71% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Red carotenoid protein (rcp)	protein	134	71% helix, 0% strand	Q8YXT8

Ligands and binding sites

BCR · Beta-carotene · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	227	0.66	0.83	26	BCR

Compared structures

5FCY · Structure of Anabaena (Nostoc) sp. PCC 7120 Red Carotenoid Protein binding a mixture of… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8YXT8
Elsewhere: RCSB PDB 5FCY · PDBe 5FCY · UniProt Q8YXT8

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